Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHYPA_007578 | PHYPA_013382 | A0A2K1KJF9 | G4XIR2 | RECA_2 domain-containing protein. | Rad50. | 0.875 |
PHYPA_007578 | PHYPA_015365 | A0A2K1KJF9 | A0A2K1JVP6 | RECA_2 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.938 |
PHYPA_007578 | PHYPA_019815 | A0A2K1KJF9 | A0A2K1JDC8 | RECA_2 domain-containing protein. | TP6A_N domain-containing protein. | 0.774 |
PHYPA_007578 | PHYPA_020862 | A0A2K1KJF9 | A0A2K1J898 | RECA_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.866 |
PHYPA_007578 | PHYPA_027903 | A0A2K1KJF9 | A0A2K1IIV2 | RECA_2 domain-containing protein. | RECA_2 domain-containing protein. | 0.972 |
PHYPA_007578 | PHYPA_029996 | A0A2K1KJF9 | A0A2K1IF00 | RECA_2 domain-containing protein. | RECA_2 domain-containing protein. | 0.969 |
PHYPA_007578 | PprecA2 | A0A2K1KJF9 | A4PHN3 | RECA_2 domain-containing protein. | RecA; Belongs to the RecA family. | 0.943 |
PHYPA_007578 | TOP6B | A0A2K1KJF9 | A0A2K1IN99 | RECA_2 domain-containing protein. | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | 0.404 |
PHYPA_007578 | rad51B | A0A2K1KJF9 | Q93W51 | RECA_2 domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.938 |
PHYPA_013382 | PHYPA_007578 | G4XIR2 | A0A2K1KJF9 | Rad50. | RECA_2 domain-containing protein. | 0.875 |
PHYPA_013382 | PHYPA_015365 | G4XIR2 | A0A2K1JVP6 | Rad50. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.874 |
PHYPA_013382 | PHYPA_019815 | G4XIR2 | A0A2K1JDC8 | Rad50. | TP6A_N domain-containing protein. | 0.777 |
PHYPA_013382 | PHYPA_020862 | G4XIR2 | A0A2K1J898 | Rad50. | ERCC4 domain-containing protein. | 0.838 |
PHYPA_013382 | PHYPA_024837 | G4XIR2 | A0A2K1IUE4 | Rad50. | Uncharacterized protein; Belongs to the RecA family. | 0.875 |
PHYPA_013382 | PHYPA_027903 | G4XIR2 | A0A2K1IIV2 | Rad50. | RECA_2 domain-containing protein. | 0.863 |
PHYPA_013382 | PHYPA_029996 | G4XIR2 | A0A2K1IF00 | Rad50. | RECA_2 domain-containing protein. | 0.863 |
PHYPA_013382 | PprecA2 | G4XIR2 | A4PHN3 | Rad50. | RecA; Belongs to the RecA family. | 0.863 |
PHYPA_013382 | rad51B | G4XIR2 | Q93W51 | Rad50. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | 0.874 |
PHYPA_015365 | PHYPA_007578 | A0A2K1JVP6 | A0A2K1KJF9 | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | RECA_2 domain-containing protein. | 0.938 |
PHYPA_015365 | PHYPA_013382 | A0A2K1JVP6 | G4XIR2 | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. | Rad50. | 0.874 |
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