Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHYPA_006083 | PHYPA_012751 | A0A2K1KN29 | A9SH79 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Predicted protein. | 0.971 |
PHYPA_006083 | PHYPA_012927 | A0A2K1KN29 | A9SL09 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | PsaH photosystem I reaction center subunit. | 0.989 |
PHYPA_006083 | PHYPA_018025 | A0A2K1KN29 | A0A2K1JGD5 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.568 |
PHYPA_006083 | PHYPA_019380 | A0A2K1KN29 | A0A2K1JC42 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.993 |
PHYPA_006083 | PHYPA_019944 | A0A2K1KN29 | A0A2K1JDR4 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.952 |
PHYPA_006083 | psaJ | A0A2K1KN29 | Q6YXM2 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.996 |
PHYPA_012751 | PHYPA_006083 | A9SH79 | A0A2K1KN29 | Predicted protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.971 |
PHYPA_012751 | PHYPA_012927 | A9SH79 | A9SL09 | Predicted protein. | PsaH photosystem I reaction center subunit. | 0.962 |
PHYPA_012751 | PHYPA_018025 | A9SH79 | A0A2K1JGD5 | Predicted protein. | Uncharacterized protein. | 0.585 |
PHYPA_012751 | PHYPA_019380 | A9SH79 | A0A2K1JC42 | Predicted protein. | Uncharacterized protein. | 0.900 |
PHYPA_012751 | PHYPA_019944 | A9SH79 | A0A2K1JDR4 | Predicted protein. | Uncharacterized protein. | 0.962 |
PHYPA_012751 | psaJ | A9SH79 | Q6YXM2 | Predicted protein. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.968 |
PHYPA_012927 | PHYPA_006083 | A9SL09 | A0A2K1KN29 | PsaH photosystem I reaction center subunit. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.989 |
PHYPA_012927 | PHYPA_012751 | A9SL09 | A9SH79 | PsaH photosystem I reaction center subunit. | Predicted protein. | 0.962 |
PHYPA_012927 | PHYPA_018025 | A9SL09 | A0A2K1JGD5 | PsaH photosystem I reaction center subunit. | Uncharacterized protein. | 0.590 |
PHYPA_012927 | PHYPA_019380 | A9SL09 | A0A2K1JC42 | PsaH photosystem I reaction center subunit. | Uncharacterized protein. | 0.992 |
PHYPA_012927 | PHYPA_019944 | A9SL09 | A0A2K1JDR4 | PsaH photosystem I reaction center subunit. | Uncharacterized protein. | 0.900 |
PHYPA_012927 | psaJ | A9SL09 | Q6YXM2 | PsaH photosystem I reaction center subunit. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.989 |
PHYPA_018025 | PHYPA_006083 | A0A2K1JGD5 | A0A2K1KN29 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.568 |
PHYPA_018025 | PHYPA_012751 | A0A2K1JGD5 | A9SH79 | Uncharacterized protein. | Predicted protein. | 0.585 |
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