STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_013143Uncharacterized protein. (116 aa)    
Predicted Functional Partners:
PHYPA_001234
4-hydroxyphenylpyruvate dioxygenase.
     
 0.669
PHYPA_002722
4-hydroxyphenylpyruvate dioxygenase.
     
 0.669
PHYPA_028916
Deacetylase sirtuin-type domain-containing protein.
    
 0.604
PHYPA_022480
NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
 0.604
PHYPA_024729
Uncharacterized protein.
    
 0.543
PHYPA_009705
Uncharacterized protein.
    
 0.543
PHYPA_015489
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
     
 0.517
PHYPA_006259
SAM_MPBQ_MSBQ_MT domain-containing protein.
     
 0.497
PHYPA_004871
SAM_MPBQ_MSBQ_MT domain-containing protein.
     
 0.497
PHYPA_014519
Uncharacterized protein.
   
 
  0.481
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.