STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_011709ATP-dependent Clp protease proteolytic subunit. (307 aa)    
Predicted Functional Partners:
PHYPA_008239
ATP-dependent Clp protease proteolytic subunit.
  
0.956
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
0.942
PHYPA_022195
ATP-dependent Clp protease proteolytic subunit.
  
0.935
PHYPA_018447
ATP-dependent Clp protease proteolytic subunit.
  
0.935
PHYPA_017683
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
0.897
PHYPA_004318
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
0.896
PHYPA_015730
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.869
PHYPA_004338
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.868
PHYPA_006789
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.854
PHYPA_030393
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.853
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.