STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_009413SIS domain-containing protein. (209 aa)    
Predicted Functional Partners:
PHYPA_020457
Uncharacterized protein.
    
 0.728
PHYPA_015555
Predicted protein.
     
 0.626
PHYPA_028916
Deacetylase sirtuin-type domain-containing protein.
   
 0.620
PHYPA_022480
NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
   
 0.620
PHYPA_018725
Uncharacterized protein.
   
 0.549
PHYPA_024148
HATPase_c domain-containing protein.
    
 0.524
PHYPA_019673
HATPase_c domain-containing protein.
    
 0.524
PHYPA_019906
SH3 domain-containing protein.
    
 0.524
PHYPA_016601
HATPase_c domain-containing protein.
    
 0.524
PHYPA_012960
Uncharacterized protein.
    
 0.524
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.