STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_008073AAA domain-containing protein. (729 aa)    
Predicted Functional Partners:
PHYPA_022224
Uncharacterized protein.
    
   0.843
PHYPA_007226
Predicted protein.
   
   0.744
PHYPA_020378
Predicted protein.
   
   0.744
PHYPA_024745
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.658
PHYPA_027589
Peptidase_M48 domain-containing protein.
  
 
 0.597
PHYPA_018060
PHB domain-containing protein.
   
 0.568
PHYPA_012317
PDZ domain-containing protein.
   
 0.568
PHYPA_009212
Uncharacterized protein.
   
 0.568
PHYPA_008026
Predicted protein.
   
 0.568
PHYPA_007467
Predicted protein.
   
 0.568
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.