STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_000189Aldo_ket_red domain-containing protein. (367 aa)    
Predicted Functional Partners:
PHYPA_010624
Predicted protein.
    
 0.926
PHYPA_009676
Predicted protein.
   
 
 0.914
PHYPA_002943
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.911
PHYPA_022626
Uncharacterized protein.
     
  0.900
PHYPA_011605
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.675
PHYPA_008285
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.576
PHYPA_026878
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.559
PHYPA_015796
Uncharacterized protein.
    
 
 0.542
PHYPA_000654
Aldo_ket_red domain-containing protein.
  
0.511
PHYPA_007116
Uncharacterized protein.
   
  
 0.501
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.