STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_001021Nudix hydrolase domain-containing protein. (403 aa)    
Predicted Functional Partners:
PHYPA_002943
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 0.977
PHYPA_031142
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.920
PHYPA_015131
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.920
PHYPA_006997
Uncharacterized protein.
   
 0.911
PHYPA_004209
Predicted protein.
   
 0.911
PHYPA_030757
Uncharacterized protein.
    
 0.905
PHYPA_021064
Uncharacterized protein.
    
 0.905
PHYPA_009099
Uncharacterized protein.
    
 0.905
PHYPA_007624
Uncharacterized protein.
    
 0.905
PHYPA_013472
Nudix hydrolase domain-containing protein.
  
  
 
0.901
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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