STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_001178Purple acid phosphatase. (687 aa)    
Predicted Functional Partners:
PHYPA_023202
Beta-hexosaminidase.
  
  
 0.700
PHYPA_016309
Beta-hexosaminidase.
  
  
 0.700
PHYPA_016941
GP-PDE domain-containing protein.
  
  
 0.694
PHYPA_016334
GP-PDE domain-containing protein.
  
  
 0.694
PHYPA_006055
GP-PDE domain-containing protein.
  
  
 0.694
PHYPA_004980
GP-PDE domain-containing protein.
  
  
 0.694
PHYPA_022578
Predicted protein.
      
 0.650
PHYPA_018408
Nudix hydrolase domain-containing protein.
   
 0.522
PHYPA_003424
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
     
 0.421
PHYPA_016056
Nudix hydrolase domain-containing protein.
    
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.