STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_001242Nudix hydrolase domain-containing protein. (258 aa)    
Predicted Functional Partners:
PHYPA_015428
Nudix hydrolase domain-containing protein.
      
 0.481
PHYPA_025275
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
      
 0.473
PHYPA_019634
Nudix hydrolase domain-containing protein.
      
 0.461
PHYPA_003884
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
      
 0.441
PHYPA_009233
Nudix hydrolase domain-containing protein.
      
0.437
PHYPA_000379
Nudix hydrolase domain-containing protein.
      
 0.428
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.