STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_028528Predicted protein; Belongs to the calmodulin family. (149 aa)    
Predicted Functional Partners:
PHYPA_005833
Predicted protein.
   
 0.777
PHYPA_001265
Peptidylprolyl isomerase.
   
 0.712
PHYPA_001179
Predicted protein.
   
 0.712
PHYPA_001334
Uncharacterized protein.
    
  0.708
ena1
Na+ P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
   
 
 0.685
PHYPA_027801
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.676
PHYPA_022476
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.676
PHYPA_018837
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.676
PHYPA_011284
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.676
PHYPA_005903
Uncharacterized protein.
   
 
 0.667
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.