Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PHYPA_002166 | PHYPA_003896 | A0A2K1L025 | A0A2K1KSY4 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.994 |
| PHYPA_002166 | PHYPA_004039 | A0A2K1L025 | A0A2K1KTH1 | Uncharacterized protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
| PHYPA_002166 | PHYPA_008914 | A0A2K1L025 | A9T7C2 | Uncharacterized protein. | Predicted protein. | 0.998 |
| PHYPA_002166 | PHYPA_013979 | A0A2K1L025 | A9T079 | Uncharacterized protein. | Predicted protein. | 0.997 |
| PHYPA_002166 | PHYPA_016781 | A0A2K1L025 | A9T2J8 | Uncharacterized protein. | Predicted protein. | 0.997 |
| PHYPA_002166 | PHYPA_023269 | A0A2K1L025 | A9TUT9 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.986 |
| PHYPA_002166 | PHYPA_025342 | A0A2K1L025 | A0A2K1IVW1 | Uncharacterized protein. | Uncharacterized protein. | 0.976 |
| PHYPA_002166 | PHYPA_028725 | A0A2K1L025 | A0A2K1IFT0 | Uncharacterized protein. | General transcription factor IIH subunit. | 0.999 |
| PHYPA_002166 | PHYPA_030649 | A0A2K1L025 | A0A2K1ID12 | Uncharacterized protein. | BSD domain-containing protein. | 0.998 |
| PHYPA_002166 | PHYPA_030843 | A0A2K1L025 | A9S7R4 | Uncharacterized protein. | Predicted protein. | 0.976 |
| PHYPA_003896 | PHYPA_002166 | A0A2K1KSY4 | A0A2K1L025 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Uncharacterized protein. | 0.994 |
| PHYPA_003896 | PHYPA_004039 | A0A2K1KSY4 | A0A2K1KTH1 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.992 |
| PHYPA_003896 | PHYPA_008914 | A0A2K1KSY4 | A9T7C2 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Predicted protein. | 0.992 |
| PHYPA_003896 | PHYPA_013979 | A0A2K1KSY4 | A9T079 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Predicted protein. | 0.988 |
| PHYPA_003896 | PHYPA_016781 | A0A2K1KSY4 | A9T2J8 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Predicted protein. | 0.997 |
| PHYPA_003896 | PHYPA_023269 | A0A2K1KSY4 | A9TUT9 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.997 |
| PHYPA_003896 | PHYPA_025342 | A0A2K1KSY4 | A0A2K1IVW1 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Uncharacterized protein. | 0.979 |
| PHYPA_003896 | PHYPA_028725 | A0A2K1KSY4 | A0A2K1IFT0 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | General transcription factor IIH subunit. | 0.991 |
| PHYPA_003896 | PHYPA_030649 | A0A2K1KSY4 | A0A2K1ID12 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | BSD domain-containing protein. | 0.992 |
| PHYPA_003896 | PHYPA_030843 | A0A2K1KSY4 | A9S7R4 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Predicted protein. | 0.979 |
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