STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYPA_013502Predicted protein. (312 aa)    
Predicted Functional Partners:
PHYPA_008877
NAD(P)-bd_dom domain-containing protein.
 0.992
PHYPA_021949
Predicted protein.
 0.992
PHYPA_018109
Predicted protein.
 0.992
PHYPA_007699
Predicted protein.
 0.929
PHYPA_021674
NAD(P)-bd_dom domain-containing protein.
 
 0.918
PHYPA_018859
DHFR domain-containing protein.
    
 0.799
PHYPA_030939
Uncharacterized protein.
  
  
 0.719
PHYPA_016592
Aminotran_1_2 domain-containing protein.
  
 
 0.691
PHYPA_004952
Ubiquitin-like domain-containing protein.
   
  0.654
PHYPA_019102
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
  
 
 0.653
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.