STRINGSTRING
PP1S183_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S183_13V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S183_13V6.1Predicted protein (183 aa)    
Predicted Functional Partners:
PP1S34_112V6.1
Predicted protein (247 aa)
   
 
  0.717
PP1S90_53V6.1
Predicted protein (244 aa)
   
 
  0.707
PP1S456_27V6.1
Predicted protein (160 aa)
   
 
  0.707
PP1S13_380V6.1
Predicted protein; Belongs to the BolA/IbaG family (105 aa)
   
 
  0.697
PP1S16_130V6.1
annotation not available (479 aa)
   
   
  0.670
PP1S10_194V6.1
Predicted protein (487 aa)
   
   
  0.670
PP1S333_11V6.1
Predicted protein (279 aa)
   
 
  0.669
PP1S322_22V6.1
annotation not available (223 aa)
   
 
  0.669
PP1S135_112V6.1
Predicted protein (491 aa)
   
 
  0.669
PP1S76_212V6.1
Predicted protein; Belongs to the NifU family (171 aa)
   
   
  0.667
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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