STRINGSTRING
PETE protein (Physcomitrella patens) - STRING interaction network
"PETE" - Plastocyanin, chloroplastic in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PETEPlastocyanin, chloroplastic; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (168 aa)    
Predicted Functional Partners:
PP1S83_246V6.1
Predicted protein (155 aa)
     
   
  0.952
PP1S78_205V6.1
Predicted protein (166 aa)
     
   
  0.952
PP1S455_8V6.1
Predicted protein (372 aa)
     
   
  0.947
PP1S221_76V6.1
Predicted protein (490 aa)
     
   
  0.947
PP1S101_95V6.4
PsbY photosystem II polypeptide (368 aa)
     
   
  0.947
PP1S80_23V6.1
annotation not available (155 aa)
     
   
  0.945
PP1S345_25V6.1
Predicted protein (246 aa)
     
   
  0.945
PP1S19_276V6.1
Predicted protein (246 aa)
     
   
  0.945
PP1S121_54V6.1
Predicted protein (246 aa)
     
   
  0.945
PP1S60_65V6.1
Predicted protein (327 aa)
     
   
  0.944
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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