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STRINGSTRING
PP1S61_268V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S61_268V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S61_268V6.1Predicted protein; Belongs to the universal ribosomal protein uS12 family (142 aa)    
Predicted Functional Partners:
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
   
 
  0.993
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
   
 
  0.992
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
   
 
  0.992
PP1S83_182V6.1
Ribosomal protein ; Belongs to the bacterial ribosomal protein bL36 family (130 aa)
   
 
  0.992
PP1S404_26V6.1
40S ribosomal protein S12 ; Belongs to the eukaryotic ribosomal protein eS12 family (143 aa)
   
 
  0.991
PP1S26_289V6.1
40S ribosomal protein S12 ; Belongs to the eukaryotic ribosomal protein eS12 family (146 aa)
   
 
  0.991
PP1S194_130V6.1
40S ribosomal protein S12 ; Belongs to the eukaryotic ribosomal protein eS12 family (146 aa)
   
 
  0.991
PP1S79_157V6.1
Predicted protein (189 aa)
   
 
  0.991
PP1S58_149V6.1
Predicted protein (189 aa)
   
 
  0.991
PP1S327_43V6.1
Predicted protein (189 aa)
   
 
  0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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