Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NRT2;6 | Nia1;1 | A1ILJ1 | Q4LEW9 | Nitrate transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.890 |
NRT2;6 | Nii1 | A1ILJ1 | Q8LSZ5 | Nitrate transporter. | Ferredoxin-nitrite reductase. | 0.971 |
NRT2;6 | PHYPA_013659 | A1ILJ1 | A0A2K1JYE3 | Nitrate transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.890 |
NRT2;6 | PHYPA_018253 | A1ILJ1 | A9SHD3 | Nitrate transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.889 |
Nia1;1 | NRT2;6 | Q4LEW9 | A1ILJ1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate transporter. | 0.890 |
Nia1;1 | Nii1 | Q4LEW9 | Q8LSZ5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ferredoxin-nitrite reductase. | 0.987 |
Nia1;1 | PHYPA_013659 | Q4LEW9 | A0A2K1JYE3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.995 |
Nia1;1 | PHYPA_018253 | Q4LEW9 | A9SHD3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.995 |
Nia1;1 | PHYPA_022971 | Q4LEW9 | A0A2K1J0M3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glutamine synthetase. | 0.669 |
Nia1;1 | PHYPA_022972 | Q4LEW9 | A9RP01 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glutamine synthetase. | 0.669 |
Nia1;1 | PHYPA_025449 | Q4LEW9 | A0A2K1IW52 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. | 0.669 |
Nia1;1 | PHYPA_025470 | Q4LEW9 | A0A2K1IW72 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. | 0.669 |
Nia1;1 | PHYPA_025908 | Q4LEW9 | A9TWD3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glutamine synthetase. | 0.669 |
Nia1;1 | PHYPA_025910 | Q4LEW9 | A9TWC2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glutamine synthetase. | 0.669 |
Nii1 | NRT2;6 | Q8LSZ5 | A1ILJ1 | Ferredoxin-nitrite reductase. | Nitrate transporter. | 0.971 |
Nii1 | Nia1;1 | Q8LSZ5 | Q4LEW9 | Ferredoxin-nitrite reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.987 |
Nii1 | PHYPA_013659 | Q8LSZ5 | A0A2K1JYE3 | Ferredoxin-nitrite reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.987 |
Nii1 | PHYPA_018253 | Q8LSZ5 | A9SHD3 | Ferredoxin-nitrite reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.987 |
Nii1 | PHYPA_022971 | Q8LSZ5 | A0A2K1J0M3 | Ferredoxin-nitrite reductase. | Glutamine synthetase. | 0.983 |
Nii1 | PHYPA_022972 | Q8LSZ5 | A9RP01 | Ferredoxin-nitrite reductase. | Glutamine synthetase. | 0.983 |
page 1 of 5