STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSEI_0211Effector of nucleoid occlusion Noc; Belongs to the ParB family. (276 aa)    
Predicted Functional Partners:
LSEI_0212
Chromosome segregation ATPase.
 
 
 0.994
LSEI_0213
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
 
   
0.971
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.964
LSEI_1975
Chromosome partitioning ATPase.
 
 
 0.958
LSEI_0916
DNA segregation ATPase FtsK/SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.717
LSEI_0214
Hypothetical protein.
       0.698
ychF
Predicted GTPase, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
 
    0.686
LSEI_1712
DNA segregation ATPase FtsK/SpoIIIE related protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.684
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
   
  
 0.652
LSEI_0216
Uncharacterized membrane-bound protein conserved in bacteria.
       0.650
Your Current Organism:
Lactobacillus paracasei
NCBI taxonomy Id: 321967
Other names: L. paracasei ATCC 334, Lactobacillus casei ATCC 334, Lactobacillus casei str. ATCC 334, Lactobacillus casei strain ATCC 334, Lactobacillus paracasei ATCC 334
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.