STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSEI_0324Transcriptional antiterminator, BglG family. (698 aa)    
Predicted Functional Partners:
LSEI_0325
Phosphotransferase system, galactitol-specific IIB component.
 
 
 0.976
LSEI_0326
PTS system IIC component, L-Asc family; TC 4.A.7.
 
 
 0.925
LSEI_0329
Predicted kinase.
 
     0.833
LSEI_2888
Phosphotransferase system, mannitol-specific IIBC component.
 
 
 0.780
LSEI_1347
TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
 
 0.760
LSEI_2654
TC 4.A.2.1.8; TC 4.A.2.1.8; TC 4.A.2.1.8.
  
 
 0.760
LSEI_2886
PTS system D-mannitol-specific IIA component, Fru family; TC 4.A.2.1.2.
 
 
 0.753
LSEI_0328
Fructose-bisphosphate aldolase.
 
 
 0.700
LSEI_2737
PTS system IIC component, L-Asc family; TC 4.A.7.
 
 
 0.680
mtlD
D-mannitol 1-phosphate 5-dehydrogenase.
 
 
 0.680
Your Current Organism:
Lactobacillus paracasei
NCBI taxonomy Id: 321967
Other names: L. paracasei ATCC 334, Lactobacillus casei ATCC 334, Lactobacillus casei str. ATCC 334, Lactobacillus casei strain ATCC 334, Lactobacillus paracasei ATCC 334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.