STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (591 aa)    
Predicted Functional Partners:
KXB77673.1
DNA polymerase III, delta subunit; KEGG: pgt:PGTDC60_0871 9.0e-73 hypothetical protein; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.992
KXB76376.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.991
KXB76885.1
KEGG: pgi:PG0035 0. dnaE; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.989
KXB76377.1
Exonuclease; KEGG: pdi:BDI_0695 8.7e-91 DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
   
 0.959
KXB77087.1
Hypothetical protein; KEGG: pgn:PGN_1015 1.2e-82 DNA polymerase III delta prime subunit; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
  
  
 
0.906
KXB76550.1
KEGG: shn:Shewana3_3590 1.5e-08 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.882
KXB76165.1
Hypothetical protein; KEGG: ank:AnaeK_0830 1.6e-05 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
    
 
 0.784
KXB74728.1
Exonuclease; KEGG: mpl:Mpal_2298 4.3e-18 Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
   
 0.779
KXB77976.1
DNA polymerase III, epsilon subunit domain protein; KEGG: bsa:Bacsa_0329 2.2e-53 Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
   
 0.741
KXB77703.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: pru:PRU_1443 4.7e-186 S9 family peptidase.
       0.673
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
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