STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76707.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
KXB76706.1
Hypothetical protein.
      
0.613
KXB76708.1
Hypothetical protein.
       0.531
KXB73915.1
OmpA family protein; KEGG: rcm:A1E_04945 6.4e-09 gmk; guanylate kinase K03640; Psort location: OuterMembrane, score: 9.93.
   
   0.502
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.463
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.