STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76049.1Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: pdi:BDI_1976 3.8e-294 beta-galactosidase; K01190 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (833 aa)    
Predicted Functional Partners:
KXB76048.1
Hypothetical protein; KEGG: bbb:BIF_01564 9.1e-48 Methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.792
KXB72871.1
YhcH/YjgK/YiaL family protein; KEGG: snc:HMPREF0837_11934 4.7e-12 beta-galactosidase, subunit beta; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.754
KXB74688.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.704
KXB74723.1
Hypothetical protein; KEGG: osp:Odosp_3258 2.0e-169 alpha-L-fucosidase.
  
     0.664
KXB77038.1
KEGG: bfr:BF3375 0. beta-galactosidase; K01190 beta-galactosidase.
  
  
 
0.652
KXB76744.1
Putative galactose mutarotase; Converts alpha-aldose to the beta-anomer.
 
 
 0.622
KXB76156.1
Putative glucokinase; KEGG: pgt:PGTDC60_0564 1.5e-141 glucose kinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.564
KXB76742.1
Galactokinase; KEGG: pdi:BDI_1666 7.7e-154 galactokinase; K00849 galactokinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.556
KXB77959.1
Hypothetical protein; KEGG: fjo:Fjoh_4436 1.3e-78 glucan 1,6-alpha-isomaltosidase.
 
 
 0.543
KXB75348.1
F5/8 type C domain protein; KEGG: pdi:BDI_2739 5.5e-192 glycoside hydrolase; K01206 alpha-L-fucosidase.
 
   
 0.498
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
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