STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75342.1Putative outer membrane protein 40; KEGG: apb:SAR116_2300 3.1e-05 peptidoglycan-associated lipoprotein K03640; Psort location: OuterMembrane, score: 9.93. (391 aa)    
Predicted Functional Partners:
KXB73911.1
Hypothetical protein.
  
   0.791
KXB75343.1
Putative outer membrane protein 41; KEGG: ctt:CtCNB1_3941 0.00010 cytochrome C oxidase subunit II; K02275 cytochrome c oxidase subunit II; Psort location: OuterMembrane, score: 9.93.
 
    
0.788
KXB78488.1
Sporulation and cell division repeat protein.
  
     0.762
KXB72865.1
Hypothetical protein.
  
 
   0.747
KXB76078.1
Hypothetical protein.
  
     0.743
KXB76960.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.740
KXB78669.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.731
KXB77039.1
Hypothetical protein.
  
     0.725
KXB77203.1
Hypothetical protein; KEGG: nhl:Nhal_1696 1.6e-06 ATPase P; K01533 Cu2+-exporting ATPase.
  
   0.707
KXB76114.1
Hypothetical protein.
  
   0.705
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.