STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74421.1Glycosyl hydrolase family 3 protein; KEGG: pah:Poras_0662 3.0e-81 beta-N-acetylhexosaminidase. (443 aa)    
Predicted Functional Partners:
KXB74422.1
Beta-lactamase; KEGG: sli:Slin_5392 1.2e-69 beta-N-acetylhexosaminidase.
 
 0.997
KXB74372.1
Hypothetical protein.
 
 
 0.899
KXB76029.1
D-Ala-D-Ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
   
 0.726
KXB76583.1
Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: pgt:PGTDC60_2040 6.1e-58 dacB; D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Periplasmic, score: 9.76.
    
 0.718
KXB74420.1
GtrA-like protein; KEGG: dly:Dehly_0597 1.9e-05 dolichyl-phosphate beta-D-mannosyltransferase K00721; Psort location: CytoplasmicMembrane, score: 9.82.
       0.706
KXB74419.1
Hypothetical protein; KEGG: atm:ANT_27200 1.7e-21 putative phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.682
udk
Uridine kinase; KEGG: pgn:PGN_1722 7.1e-80 uridine kinase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
       0.679
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.670
KXB78252.1
Peptidase, M23 family; KEGG: nmw:NMAA_1672 1.4e-22 putative metallopeptidase; Psort location: OuterMembrane, score: 9.93.
 
  
 0.618
KXB77959.1
Hypothetical protein; KEGG: fjo:Fjoh_4436 1.3e-78 glucan 1,6-alpha-isomaltosidase.
  
  
 0.611
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
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