STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (214 aa)    
Predicted Functional Partners:
pyrF
KEGG: pgi:PG0073 1.2e-102 orotidine 5'-monophosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase; Psort location: Cytoplasmic, score: 8.96; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.989
KXB74277.1
KEGG: bhl:Bache_2300 1.9e-56 dihydroorotate oxidase B, electron transfer subunit K02823.
  
 
 0.987
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.969
KXB75204.1
Putative dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.967
KXB73432.1
Dihydroorotase; KEGG: pgn:PGN_1027 5.2e-164 dihydroorotase; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.947
pyrB
KEGG: pgi:PG0357 3.6e-124 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
  
 0.924
KXB73538.1
KEGG: pgn:PGN_1443 0. carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.918
KXB76590.1
KEGG: pah:Poras_0855 2.1e-119 ribose-phosphate pyrophosphokinase K00948; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.900
carA
KEGG: pgt:PGTDC60_1647 2.9e-147 carA; carbamoyl phosphate synthase, small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
  
 0.889
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.881
Your Current Organism:
Porphyromonas somerae
NCBI taxonomy Id: 322095
Other names: CCUG 51464, DSM 23386, JCM 13867, P. somerae, Porphyromonas somerae Summanen et al. 2006 emend. Hahnke et al. 2016, WAL 6690
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