STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_53348Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
RPS2
40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44); Belongs to the universal ribosomal protein uS5 family.
    
 0.999
NOB1
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
ENP1
Bystin-family protein putative nuclear protein.
   
 0.999
PICST_71429
Bms1-type G domain-containing protein.
   
 0.999
HRR25
Casein kinase I; Belongs to the protein kinase superfamily.
    
 0.999
PICST_33379
RIO domain-containing protein.
   
 0.999
PNO1
Predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly.
   
 0.998
RS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.997
PICST_82366
KH type-2 domain-containing protein.
   
 0.997
RSP14
40S ribosomal protein S14-B (RP59B); Belongs to the universal ribosomal protein uS11 family.
    
 0.997
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.