STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_45688Pyr_redox_2 domain-containing protein. (370 aa)    
Predicted Functional Partners:
YAH1
Mitochondrial matrix iron-sulfur protein.
  
 0.663
GCV2
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.490
PICST_53135
DAO domain-containing protein.
  
 0.442
DAD1
Highly conserved oxidoreductase.
  
 0.442
DAO1
D-amino acid oxidase.
  
 0.442
YXE1
Uncharacterized protein.
  
 0.442
PICST_58359
Rieske domain-containing protein.
  
 0.442
PICST_59125
Ring_hydroxyl_A domain-containing protein.
  
 0.442
DAO2
D-amino acid oxidase.
  
 0.442
IFG3
D-aspartate oxidase.
  
 0.442
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.