STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THR4Threonine synthase. (511 aa)    
Predicted Functional Partners:
THR1
Homoserine kinase.
 
 
 0.999
HOM6
Homoserine dehydrogenase.
  
 0.996
ILV1
Threonine dehydratase.
  
 
 0.982
PICST_54974
PALP domain-containing protein.
  
 
 0.971
PICST_30154
PALP domain-containing protein.
  
 
 0.971
SER1
Phosphoserine aminotransferase.
   
 0.966
HOM3
Aspartokinase.
  
 0.954
GLY2
Threonine aldolase.
  
 0.939
GLY1
Threonine aldolase.
  
 0.939
PSP1
Phosphoserine phosphatase activity.
   
 0.921
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.