STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YOX1Homeobox-domain containing protein. (440 aa)    
Predicted Functional Partners:
MCM1
Transcription factor of the MADS box family.
    
 0.969
PICST_32431
Homeobox domain-containing protein.
    
 
 0.659
ETF3
Translation elongation factor.
    
 
 0.641
USV1
Up in starvation.
   
 
 0.633
PICST_31817
Uncharacterized protein.
    
 
 0.623
RPS7A
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.591
MATa2
Mating locus regulatory protein.
    
 
 0.587
GLN1
Glutamine synthetase.
   
  
 0.540
SGA1
Glucoamylase GLU1 (Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase).
      
 0.520
GZF3
Zinc finger Dal80-like transcriptional repressor.
  
 
 0.514
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.