STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICST_48230Uncharacterized protein. (1328 aa)    
Predicted Functional Partners:
PICST_60945
WD_REPEATS_REGION domain-containing protein.
    
 0.993
PICST_29193
Protein kinase domain-containing protein.
    
 0.922
CHS7
Protein involved in chitin synthesis.
    
 0.808
PICST_35327
Guanine nucleotide-binding protein alpha subunit.
    
 0.808
PICST_89074
Uncharacterized protein.
    
 0.808
PLC1
Phosphoinositide phospholipase C.
    
 0.689
PICST_84114
Uncharacterized protein.
    
 0.680
PHO81
Positive regulatory protein of phosphate pathway.
    
 0.653
SQT1
Ribosome assembly protein SQT1.
    
 0.609
CDA2
Chitin deacetylase 2.
    
 0.606
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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