STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BNI4Bud neck involved protein. (1404 aa)    
Predicted Functional Partners:
GLC7
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.879
CDC10
Septin; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.764
CHS4
Chitin synthase regulatory factor.
    
 
 0.761
PICST_88728
Uncharacterized protein.
    
 
 0.669
ETF3
Translation elongation factor.
    
 
 0.665
CHS1
Chitin synthase; Plays a major role in cell wall biogenesis.
      
 0.653
CSH8
Chitin synthase; Plays a major role in cell wall biogenesis.
      
 0.638
ARP4
Actin-related protein; Belongs to the actin family.
    
 0.635
SPT15
TATA-binding protein.
   
 0.623
PICST_62437
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family.
   
 0.621
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.