STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHB1GTP-binding protein of the ras family. (182 aa)    
Predicted Functional Partners:
TSC2
Tuberous sclerosis 2 protein homolog.
    
 0.997
TOR2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.972
RGA1
Rho-type GTPase-activating protein.
    
 0.949
KOG1
Kontroller Of Growth.
    
 0.925
LST8
Protein required for amino acid permease transport from the Golgi to the cell surface.
    
 0.870
PICST_35930
Uncharacterized protein.
     
 0.854
PICST_30449
Uncharacterized protein.
    
 0.838
PICST_89961
Uncharacterized protein.
   
 0.827
PICST_29411
Flavin_Reduct domain-containing protein.
   
 0.809
HSP90
Heat shock protein 90 homolog.
   
 0.809
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.