STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (261 aa)    
Predicted Functional Partners:
RPL16B
60S large subunit ribosomal protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
RPS2
40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44); Belongs to the universal ribosomal protein uS5 family.
  
 0.999
RPL34
Ribosomal protein L34.
  
 
 0.999
RPL2A
60S large subunit ribosomal protein L2A.
  
 
 0.999
RPL7B
60S large subunit ribosomal protein.
  
 
 0.999
RPL20
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.999
RS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
PICST_74639
Ribosomal protein L4/L1e.
  
 0.999
PICST_69783
Large subunit ribosomal protein L12.e; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.999
PICST_66616
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.