STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARDHD-arabinitol 2-dehydrogenase [ribulose-forming]; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)    
Predicted Functional Partners:
XYL2
D-xylulose reductase; Belongs to the zinc-containing alcohol dehydrogenase family.
  
 
 0.615
RKS1
Possible ribitol kinase or glycerol kinase.
   
 0.614
AAD1
Alcohol dehydrogenase, class III, bacterial-like protein.
   
 0.594
CMD1
Calmodulin; Belongs to the calmodulin family.
   
 0.454
UGA2
Succinate-semialdehyde dehydrogenase.
  
 0.449
UGA22
Succinate-semialdehyde dehydrogenase.
  
 0.449
XKS1
D-xylulokinase.
  
 
 0.444
PICST_54590
MaoC-like domain-containing protein.
  
0.434
CEM1
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.428
YKH1.3
Putative short chain dehydrogenase.
  
 
 
 0.420
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.