STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG4Argininosuccinate lyase. (464 aa)    
Predicted Functional Partners:
ARG1
Argininosuccinate synthetase.
 
 
 0.999
PICST_55623
N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.998
ECM40
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
  
 0.972
CAR1
Arginase; Belongs to the arginase family.
     
 0.956
ADE13
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.956
ARG2
Amino-acid acetyltransferase, mitochondrial; N-acetylglutamate synthase involved in arginine biosynthesis. Belongs to the acetyltransferase family.
  
 
 0.945
HIS2
Histidine biosynthesis trifunctional protein.
  
  
 0.935
CAR2
Ornithine aminotransferase.
  
 
 0.929
CPA2
Carbamoyl-phosphate synthase large subunit.
  
 
 0.909
CIT1
Citrate synthase; Belongs to the citrate synthase family.
    
 0.896
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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