STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (775 aa)    
Predicted Functional Partners:
PICST_43636
Adenine nucleotide alpha hydrolase.
   
 0.980
PICST_82366
KH type-2 domain-containing protein.
  
 0.868
PICST_76097
Ribosomal protein L5.
  
 0.868
RPS2
40S ribosomal protein S2 (S4) (YS5) (RP12) (Omnipotent suppressor protein SUP44); Belongs to the universal ribosomal protein uS5 family.
 
 0.866
PICST_66616
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.865
PICST_61259
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
  
 0.864
PICST_85685
Uncharacterized protein.
  
 0.864
PICST_60011
Uncharacterized protein.
  
 
 0.861
RPL12B
60S ribosomal protein L7/L12.
  
 
 0.859
MRP17
Mitochondrial ribosomal protein.
  
 
 0.856
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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