Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APT1 | DUR3.1 | A3LN46 | A3GG30 | Adenine phosphoribosyltransferase. | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.448 |
APT1 | TRP5 | A3LN46 | A3GH63 | Adenine phosphoribosyltransferase. | Tryptophan synthase. | 0.795 |
CIT1 | DUR1 | A3M0F2 | A3GG31 | Citrate synthase; Belongs to the citrate synthase family. | Urea amidolyase. | 0.588 |
CIT1 | DUR3.1 | A3M0F2 | A3GG30 | Citrate synthase; Belongs to the citrate synthase family. | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.406 |
CIT1 | PICST_55623 | A3M0F2 | A3LQ97 | Citrate synthase; Belongs to the citrate synthase family. | N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.727 |
CIT1 | PUT1 | A3M0F2 | A3LVP7 | Citrate synthase; Belongs to the citrate synthase family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.769 |
CIT1 | TRP5 | A3M0F2 | A3GH63 | Citrate synthase; Belongs to the citrate synthase family. | Tryptophan synthase. | 0.780 |
DUR1 | CIT1 | A3GG31 | A3M0F2 | Urea amidolyase. | Citrate synthase; Belongs to the citrate synthase family. | 0.588 |
DUR1 | DUR3.1 | A3GG31 | A3GG30 | Urea amidolyase. | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.668 |
DUR1 | PICST_55623 | A3GG31 | A3LQ97 | Urea amidolyase. | N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.916 |
DUR1 | PUT1 | A3GG31 | A3LVP7 | Urea amidolyase. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.522 |
DUR1 | TRP5 | A3GG31 | A3GH63 | Urea amidolyase. | Tryptophan synthase. | 0.794 |
DUR3.1 | APT1 | A3GG30 | A3LN46 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Adenine phosphoribosyltransferase. | 0.448 |
DUR3.1 | CIT1 | A3GG30 | A3M0F2 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Citrate synthase; Belongs to the citrate synthase family. | 0.406 |
DUR3.1 | DUR1 | A3GG30 | A3GG31 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Urea amidolyase. | 0.668 |
DUR3.1 | NCS6 | A3GG30 | A3GGB3 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.431 |
DUR3.1 | PICST_55623 | A3GG30 | A3LQ97 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | N-acetyl-gamma-glutamyl-phosphate reductase and acetylglutamate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.480 |
DUR3.1 | PUT1 | A3GG30 | A3LVP7 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. | 0.567 |
DUR3.1 | TRP5 | A3GG30 | A3GH63 | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Tryptophan synthase. | 0.626 |
NCS6 | DUR3.1 | A3GGB3 | A3GG30 | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | Urea active transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.431 |
page 1 of 2