Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DUR1 | GLN2 | A3GG31 | A3LW45 | Urea amidolyase. | Predicted glutamine synthetase glutamine amidotransferase. | 0.662 |
DUR1 | GLN4 | A3GG31 | A3LWA5 | Urea amidolyase. | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.454 |
DUR1 | GUA1 | A3GG31 | A3LQ84 | Urea amidolyase. | GMP synthase. | 0.661 |
DUR1 | MSD1 | A3GG31 | A3LXG1 | Urea amidolyase. | Aspartyl-tRNA synthetase. | 0.600 |
DUR1 | PET112 | A3GG31 | A3GFV6 | Urea amidolyase. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.982 |
DUR1 | PICST_39982 | A3GG31 | A3GI76 | Urea amidolyase. | Uncharacterized protein; Belongs to the asparaginase 1 family. | 0.408 |
DUR1 | SYN3 | A3GG31 | A3LY69 | Urea amidolyase. | Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase) (AsnRS). | 0.462 |
DUR1 | SYN4 | A3GG31 | A3LY66 | Urea amidolyase. | Asparaginyl-tRNA synthetase. | 0.553 |
GLN2 | DUR1 | A3LW45 | A3GG31 | Predicted glutamine synthetase glutamine amidotransferase. | Urea amidolyase. | 0.662 |
GLN2 | GUA1 | A3LW45 | A3LQ84 | Predicted glutamine synthetase glutamine amidotransferase. | GMP synthase. | 0.766 |
GLN2 | MSD1 | A3LW45 | A3LXG1 | Predicted glutamine synthetase glutamine amidotransferase. | Aspartyl-tRNA synthetase. | 0.812 |
GLN2 | PET112 | A3LW45 | A3GFV6 | Predicted glutamine synthetase glutamine amidotransferase. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.913 |
GLN2 | PICST_39982 | A3LW45 | A3GI76 | Predicted glutamine synthetase glutamine amidotransferase. | Uncharacterized protein; Belongs to the asparaginase 1 family. | 0.728 |
GLN4 | DUR1 | A3LWA5 | A3GG31 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Urea amidolyase. | 0.454 |
GLN4 | GTA2 | A3LWA5 | A3LNS1 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. | 0.943 |
GLN4 | GTF1 | A3LWA5 | A3LU55 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Glutamyl-tRNA(Gln) amidotransferase subunit F, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Required for proper protein synthesis within the mitochondrion; Belongs to the GatF family. | 0.900 |
GLN4 | GUA1 | A3LWA5 | A3LQ84 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | GMP synthase. | 0.463 |
GLN4 | MSD1 | A3LWA5 | A3LXG1 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Aspartyl-tRNA synthetase. | 0.657 |
GLN4 | PET112 | A3LWA5 | A3GFV6 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.979 |
GLN4 | PICST_39982 | A3LWA5 | A3GI76 | Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Uncharacterized protein; Belongs to the asparaginase 1 family. | 0.565 |
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