STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA160S acidic ribosomal protein P1-A; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)    
Predicted Functional Partners:
RPL28
Large subunit ribosomal protein L27Ae (RPL28); Belongs to the universal ribosomal protein uL15 family.
 
 
 0.992
RPP0
60S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...]
  
0.985
PICST_76097
Ribosomal protein L5.
   
 0.984
PICST_30944
Ribosomal_L7Ae domain-containing protein.
   
 0.984
RPL3
60S large subunit ribosomal protein L3.e; Belongs to the universal ribosomal protein uL3 family.
   
 0.984
PICST_83982
Uncharacterized protein.
   
 0.983
RPL16B
60S large subunit ribosomal protein; Belongs to the universal ribosomal protein uL13 family.
   
 0.981
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.981
PICST_85470
Uncharacterized protein.
   
 0.981
PICST_69792
Ribosomal protein L14B.
   
 0.980
Your Current Organism:
Scheffersomyces stipitis
NCBI taxonomy Id: 322104
Other names: Pichia stipitis CBS 6054, S. stipitis CBS 6054, Scheffersomyces stipitis CBS 6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.