STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD56994.1Rhamnosyltransferase. (282 aa)    
Predicted Functional Partners:
SFD57040.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.953
SFD56954.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.831
SFD56911.1
Glycosyltransferase, GT2 family.
       0.773
SFD56831.1
ABC-2 type transport system permease protein.
 
  
 0.748
SFD56790.1
Glycosyltransferase, GT2 family.
 
 
 0.728
SFD56868.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.695
SFD56745.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.671
SFD55454.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.551
SFD56438.1
Glycosyltransferase, GT2 family.
 
 
 0.550
SFD56584.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.550
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.