STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67018.1ferredoxin--NADP+ reductase. (283 aa)    
Predicted Functional Partners:
SFD67052.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
 0.998
SFD87356.1
NADPH-dependent glutamate synthase beta chain.
 0.982
SFD92758.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreT.
 0.978
SFD80748.1
Glutamate synthase (NADPH/NADH) small chain.
 
 0.972
SFD92790.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 0.968
pyrD
Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.963
SFE01765.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.940
SFD78107.1
NADPH-dependent glutamate synthase beta chain.
 0.930
SFD99476.1
NADPH-dependent glutamate synthase beta chain.
 0.907
SFD54644.1
NADPH-dependent glutamate synthase beta chain.
 
 0.902
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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