STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD65090.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
SFD65123.1
V/A-type H+-transporting ATPase subunit C.
       0.789
SFD65152.1
V/A-type H+-transporting ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
       0.721
SFD65178.1
V/A-type H+-transporting ATPase subunit K.
       0.652
SFD65208.1
V/A-type H+-transporting ATPase subunit F.
       0.637
SFD65237.1
H+-ATPase subunit E/Vma4.
       0.625
atpA-2
V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.602
atpB-2
V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.590
atpD-2
V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.590
SFD65034.1
AraC-type DNA-binding protein.
       0.432
SFD65061.1
Haloacid dehalogenase-like hydrolase.
       0.432
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.