STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD69417.1CAAX protease self-immunity. (247 aa)    
Predicted Functional Partners:
SFD69528.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
       0.773
SFD69457.1
CDP-ribitol ribitolphosphotransferase.
       0.773
SFD69491.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
       0.773
SFE14488.1
Beta-N-acetylglucosaminidase.
    
   0.736
tarI
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate.
       0.654
tarJ
Ribitol-5-phosphate 2-dehydrogenase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
       0.648
SFE47390.1
Multidrug/hemolysin transport system permease protein.
 
  
 0.621
SFD69620.1
Ig-like domain (group 2).
       0.566
SFD69713.1
Teichoic acid transport system permease protein.
  
    0.557
SFD69649.1
CDP-ribitol ribitolphosphotransferase.
       0.550
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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