STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD71809.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (185 aa)    
Predicted Functional Partners:
SFD71842.1
PTS system, cellobiose-specific IIB component.
       0.601
SFD71776.1
UTP-glucose-1-phosphate uridylyltransferase.
       0.569
SFD65350.1
Hypothetical protein.
  
 
 0.546
SFD42829.1
Nitroreductase.
 
 
 0.521
SFE15620.1
Nitroreductase.
 
 
 0.513
SFD77885.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.469
SFE18307.1
Hypothetical protein.
  
     0.465
SFE33592.1
Nicotinamidase-related amidase.
  
 
 0.440
SFD71918.1
MerR HTH family regulatory protein.
     
 0.428
SFE36782.1
FMN reductase [NAD(P)H]; Belongs to the flavin oxidoreductase frp family.
  
 
 0.421
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.