STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD83277.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (315 aa)    
Predicted Functional Partners:
SFD83226.1
Oligopeptide transport system permease protein.
 
 0.999
SFE07211.1
Oligopeptide transport system permease protein.
 
 0.997
SFD83200.1
Oligopeptide transport system permease protein.
 
 0.995
SFE07178.1
Oligopeptide transport system permease protein.
 
 0.984
SFD83252.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.978
SFD83174.1
Oligopeptide transport system substrate-binding protein.
 
 0.966
SFE53674.1
Oligopeptide transport system substrate-binding protein.
 
 0.939
SFD70839.1
ABC-type multidrug transport system, ATPase and permease component.
   
 
0.927
SFD74185.1
ATP-binding cassette, subfamily B.
   
 
0.927
SFD83793.1
ATP-binding cassette, subfamily B.
   
 
0.927
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.