STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD90205.1Flavin reductase like domain-containing protein. (156 aa)    
Predicted Functional Partners:
SFD90237.1
Transcriptional regulator, TetR family.
       0.752
SFD65350.1
Hypothetical protein.
  
 
 0.546
SFE15620.1
Nitroreductase.
 
 
 0.511
SFD90266.1
Barstar (barnase inhibitor).
       0.480
SFD90294.1
Ribonuclease.
       0.480
SFD87019.1
[FeFe] hydrogenase, group B1/B3.
  
  
  0.454
SFE33592.1
Nicotinamidase-related amidase.
  
 
 0.440
SFD97808.1
Nitroreductase.
 
     0.412
SFE05688.1
Lactoylglutathione lyase.
 
 
 0.412
SFD70103.1
Flavorubredoxin.
 
  
 0.411
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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