STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD96543.1ABC-2 type transport system ATP-binding protein. (270 aa)    
Predicted Functional Partners:
SFD96588.1
ABC-2 type transport system permease protein.
 
  
 0.949
SFD81153.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
   
 
0.928
SFE23071.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
   
 
0.921
SFD85800.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.917
SFD51393.1
Putative ABC transport system ATP-binding protein.
 
  
0.914
SFE35222.1
Cobalt/nickel transport system ATP-binding protein.
 
 
 
0.913
SFD58467.1
ABC-2 type transport system permease protein.
 
 0.898
SFE34876.1
Putative lysine transport system ATP-binding protein.
 
   
 
0.785
SFD96565.1
SdpI/YhfL protein family protein.
       0.773
SFE17411.1
Putative ABC transport system ATP-binding protein.
 
  
0.715
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.