STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE15421.1DNA-binding transcriptional regulator, IscR family. (153 aa)    
Predicted Functional Partners:
SFE15550.1
Predicted SnoaL-like aldol condensation-catalyzing enzyme.
 
    0.793
SFE15392.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
       0.777
SFE15485.1
Osmoprotectant transport system permease protein.
       0.774
SFE15516.1
Uncharacterized protein, pyridoxamine 5'-phosphate oxidase (PNPOx-like) family.
  
  
 0.760
SFE15453.1
Osmoprotectant transport system ATP-binding protein.
       0.754
SFE15359.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.705
SFD49618.1
Cysteine desulfurase.
  
 
 0.684
SFE32066.1
Cysteine desulfurase.
  
 
 0.684
SFE15323.1
Two-component system, OmpR family, response regulator protein BraR/BceR.
  
  
 0.512
SFE47717.1
Hypothetical protein.
 
  
 0.512
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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