STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE36879.1Hemerythrin-like domain-containing protein. (185 aa)    
Predicted Functional Partners:
SFE36847.1
Uncharacterized conserved protein YeaO, DUF488 family.
       0.783
SFE36912.1
Thioredoxin domain-containing protein.
       0.584
SFE36810.1
Uncharacterized protein, UPF0371 family.
       0.545
SFE35185.1
Cobalt/nickel transport system permease protein.
  
     0.451
SFD54701.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Sharpea azabuensis
NCBI taxonomy Id: 322505
Other names: DSM 18934, JCM 14210, Lactobacillus sp. DI49, Lactobacillus sp. HM244, Lactobacillus sp. HM250, Lactobacillus sp. ST#18, S. azabuensis, Sharpea azabuensis Morita et al. 2008, strain ST18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.