STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1JZI3_TETURUncharacterized protein. (104 aa)    
Predicted Functional Partners:
T1JSP0_TETUR
Tr-type G domain-containing protein.
    
 0.956
T1KZU6_TETUR
Small nuclear ribonucleoprotein Sm D3.
   
  0.952
T1KD12_TETUR
MPN domain-containing protein.
    
 0.951
T1KMZ6_TETUR
Nop domain-containing protein.
    
 0.947
T1JU61_TETUR
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.932
T1K5H5_TETUR
Sm domain-containing protein.
   
 0.925
T1KQK8_TETUR
Uncharacterized protein.
    
 0.921
T1K6R5_TETUR
Matrin-type domain-containing protein.
    
 0.919
T1KWQ4_TETUR
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.915
T1L017_TETUR
WW domain-containing protein.
   
 0.913
Your Current Organism:
Tetranychus urticae
NCBI taxonomy Id: 32264
Other names: T. urticae, red spider mite, two-spotted spider mite, twospotted mite
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